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Publications

  1. Gralka, Patrick ; Becher, Michael ; Braun, Matthias ; Frieß, Florian ; Müller, Christoph ; Rau, Tobias ; Schatz, Karsten ; Schulz, Christoph ; u. a.: MegaMol -- a comprehensive prototyping framework for visualizations. In: The European Physical Journal (Special Topics), The European Physical Journal (Special Topics). Bd. 227: Particle Methods in Natural Science and Engineering (2019), Nr. 14, S. 1817--1829
  2. Schatz, Karsten ; Krone, Michael ; Pleiss, Jürgen ; Ertl, Thomas: Interactive visualization of biomolecules’ dynamic and complex properties. In: Holm, C. ; Ertl, T. ; Schmauder, S. ; Kästner, J. ; Groß, J. (Hrsg.) The European Physical Journal (Special Topics), The European Physical Journal (Special Topics). Bd. 227: Particle Methods in Natural Science and Engineering (2019), Nr. 14, S. 1725--1739
  3. Miao, Haichao ; Klein, Tobias ; Kouřil, David ; Mindek, Peter ; Schatz, Karsten ; Gröller, Meister Eduard ; Kozlíková, Barbora ; Isenberg, Tobias ; u. a.: Multiscale Molecular Visualization. In: Wright, P. (Hrsg.) Journal of Molecular Biology, Journal of Molecular Biology. Bd. 431 (2019), Nr. 6, S. 1049–1070
  4. Miao, Haichao ; Klein, Tobias ; Kouřil, David ; Mindek, Peter ; Schatz, Karsten ; Gröller, M. Eduard ; Kozlíková, Barbora ; Isenberg, Tobias ; u. a.: Multiscale Molecular Visualization. In: Journal of Molecular Biology, Journal of Molecular Biology. (2018)
  5. Müller, Christoph ; Krone, Michael ; Huber, Markus ; Biener, Verena ; Herr, Dominik ; Koch, Steffen ; Reina, Guido ; Weiskopf, Daniel ; u. a.: Interactive Molecular Graphics for Augmented Reality Using HoloLens. In: Schreiber, F. ; Hofestädt, R. (Hrsg.) Journal of Integrative Bioinformatics, Journal of Integrative Bioinformatics. Bd. 15 (2018), Nr. 2
  6. Mwalongo, Finian ; Krone, Michael ; Reina, Guido ; Ertl, Thomas: Web-based Volume Rendering using Progressive Importance-based Data Transfer. In: Proceedings of Vision, Modeling, and Visualization (VMV), Proceedings of Vision, Modeling, and Visualization (VMV), 2018
  7. Schulz, Christoph ; Schatz, Karsten ; Krone, Michael ; Braun, Matthias ; Ertl, Thomas ; Weiskopf, Daniel: Uncertainty Visualization for Secondary Structures of Proteins. In: IEEE Pacific Visualization Symposium, IEEE Pacific Visualization Symposium, 2018, S. 96–105
  8. Rau, Tobias ; Krone, Michael ; Reina, Guido ; Ertl, Thomas: Challenges and Opportunities using Software-defined Visualization in MegaMol. In: 7th Workshop on Visual Analytics, Information Visualization and Scientific Visualization, 7th Workshop on Visual Analytics, Information Visualization and Scientific Visualization, 2017
  9. Krone, Michael ; Frieß, Florian ; Scharnowski, Katrin ; Reina, Guido ; Fademrecht, Silvia ; Kulschewski, Tobias ; Pleiss, Jürgen ; Ertl, Thomas: Molecular Surface Maps. In: IEEE Transactions on Visualization and Computer Graphics, IEEE Transactions on Visualization and Computer Graphics. Bd. 23 (2017a), S. 701–710
  10. Alharbi, Naif ; Alharbi, Mohammad ; Martinez, Xavier ; Krone, Michael ; Rose, Alexander ; Baaden, Marc ; Laramee, Robert S. ; Chavent, Matthieu: Molecular Visualization of Computational Biology Data: A Survey of Surveys. In: EuroVis 2017 Short Papers, EuroVis 2017 Short Papers, 2017
  11. Reinhardt, Stefan ; Huber, Markus ; Dumitrescu, Otilia ; Krone, Michael ; Eberhardt, Bernhard ; Weiskopf, Daniel: Visual Debugging of SPH Simulations. In: International Conference on Information Visualisation (IV), International Conference on Information Visualisation (IV). Bd. 21, 2017, S. 117–126
  12. Schatz, Karsten ; Krone, Michael ; Müller, Christoph ; Schneider, Jens ; Reina, Guido ; Ertl, Thomas: Visualization of Halo Topologies in Dark Matter Simulations. In: Proceedings of TopoInVis, Proceedings of TopoInVis, 2017. — Rezensiertes Abstract
  13. Krone, Michael ; Reina, Guido ; Zahn, Sebastian ; Tremel, Tina ; Bahnmüller, Carsten ; Ertl, Thomas: Implicit Sphere Shadow Maps. In: IEEE PacificVis - Visualization Notes, IEEE PacificVis - Visualization Notes. Bd. 4, 2017b
  14. Gralka, Patrick ; Grottel, Sebastian ; Staib, Joachim ; Schatz, Karsten ; Karch, Grzegorz Karol ; Hirschler, M. ; Krone, Michael ; Reina, Guido ; u. a.: 2016 IEEE Scientific Visualization Contest Winner: Visual and Structural Analysis of Point-based Simulation Ensembles. In: IEEE Computer Graphics & Applications, IEEE Computer Graphics & Applications. (2017)
  15. Hermosilla, Pedro ; Krone, Michael ; Guallar, Victor ; Vázquez, Pere-Pau ; Vinacua, Àlvar ; Ropinski, Timo: Interactive GPU-based Generation of Solvent Excluded Surfaces. In: The Visual Computer (Proceedings of CGI’2017), The Visual Computer (Proceedings of CGI’2017). Bd. 33, Springer (2017), Nr. 6, S. 869–881
  16. Krone, Michael ; Schatz, Karsten ; Hieronymus, Nora ; Müller, Christoph ; Becher, Michael ; Barthelmes, Tina ; Cooper, April ; Currle, Steffen ; u. a.: From Visualization Research to Public Presentation - Design and Realization of a Scientific Exhibition. In: Proceedings of SIGRAD 2017, Proceedings of SIGRAD 2017, 2017c
  17. Müller, Christoph ; Krone, Michael ; Scharnowski, Katrin ; Reina, Guido ; Ertl, Thomas: An Evaluation of the Utility of Large High-Resolution Displays for Comparative Scientific Visualisation. In: International Journal of Software and Informatics (IJSI), International Journal of Software and Informatics (IJSI). Bd. 9 (2016), Nr. 3, S. 355–370
  18. Krone, Michael ; Kozlíková, Barbora ; Lindow, Norbert ; Baaden, Marc ; Baum, Daniel ; Parulek, Julius ; Hege, Hans-Christian ; Viola, Ivan: Visual Analysis of Biomolecular Cavities: State of the Art. In: Computer Graphics Forum, Computer Graphics Forum. Bd. 35, Whiley (2016), Nr. 3
  19. Falk, Martin ; Grottel, Sebastian ; Krone, Michael ; Reina, Guido: Interactive GPU-based Visualization of Large Dynamic Particle Data. In: Synthesis Lectures on Visualization, Synthesis Lectures on Visualization. Bd. 4, Morgan & Claypool Publishers (2016), Nr. 3, S. 1--121
  20. Mwalongo, Finian ; Krone, Michael ; Reina, Guido ; Ertl, Thomas: State-of-the-Art Report in Web-based Visualization. In: Computer Graphics Forum, Computer Graphics Forum. Bd. 35, Whiley (2016b), Nr. 3
  21. Grottel, Sebastian ; Reina, Guido ; Krone, Michael ; Müller, Christoph ; Ertl, Thomas: MegaMol - for Fun and Profit. In: Workshop on Visualization in Practice, Workshop on Visualization in Practice, 2016
  22. Mwalongo, Finian ; Krone, Michael ; Becher, Michael ; Reina, Guido ; Ertl, Thomas: GPU-based Remote Visualization of Dynamic Molecular Data on the Web. In: Graphical Models, Graphical Models. Bd. 88, Elsevier (2016a)
  23. Kozlíková, Barbora ; Krone, Michael ; Falk, Martin ; Lindow, Norbert ; Baaden, Marc ; Baum, Daniel ; Viola, Ivan ; Parulek, Julius ; u. a.: Visualization of Molecular Structure: State of the Art Revisited. In: Computer Graphics Forum, Computer Graphics Forum. Bd. 36 (2016), Nr. 8, S. 178–204
  24. Schatz, Karsten ; Müller, Christoph ; Krone, Michael ; Schneider, Jens ; Reina, Guido ; Ertl, Thomas: Interactive Visual Exploration of a Trillion Particles. In: IEEE (Hrsg.) ; IEEE (Hrsg.): Symposium on Large Data Analysis and Visualization (LDAV), Symposium on Large Data Analysis and Visualization (LDAV), 2016
  25. Lawonn, Kai ; Krone, Michael ; Ertl, Thomas ; Preim, Bernhard: On the Reproducibility of Line Integral Convolution for Real-Time Illustration of Molecular Surface Shape and Salient Regions. In: EuroRV3: EuroVis Workshop on Reproducibility, Verification, and Validation in Visualization, EuroRV3: EuroVis Workshop on Reproducibility, Verification, and Validation in Visualization. Bd. 3, 2015. — Rezensiertes Abstract
  26. Grottel, Sebastian ; Krone, Michael ; Müller, Christoph ; Reina, Guido ; Ertl, Thomas: MegaMol – A Prototyping Framework for Particle-based Visualization. In: IEEE Transactions on Visualization and Computer Graphics, IEEE Transactions on Visualization and Computer Graphics. Bd. 21, IEEE (2015), Nr. 2
  27. Rau, Benjamin ; Frieß, Florian ; Krone, Michael ; Müller, Christoph ; Ertl, Thomas: Enhancing Visualization of Molecular Simulations using Sonification. In: International Workshop on Virtual and Augmented Reality for Molecular Science (VARMS@IEEEVR), International Workshop on Virtual and Augmented Reality for Molecular Science (VARMS@IEEEVR). Bd. 1 : IEEE, 2015
  28. Müller, Christoph ; Krone, Michael ; Scharnowski, Katrin ; Reina, Guido ; Ertl, Thomas: On the Utility of Large High-Resolution Displays for Comparative Scientific Visualisation. In: International Symposium on Visual Information Communication and Interaction (VINCI), International Symposium on Visual Information Communication and Interaction (VINCI). Bd. 15 : ACM, 2015, S. 131–136
  29. Scharnowski, Katrin ; Krone, Michael ; Reina, Guido ; Ertl, Thomas: On the Reproducibility of our Biomolecular Visualization. In: Aigner, W. ; Rosenthal, P. ; Scheidegger, C. (Hrsg.) ; Aigner, W. ; Rosenthal, P. ; Scheidegger, C. (Hrsg.): EuroRV3: EuroVis Workshop on Reproducibility, Verification, and Validation in Visualization, EuroRV3: EuroVis Workshop on Reproducibility, Verification, and Validation in Visualization. Bd. 3 : The Eurographics Association, 2015. — Rezensiertes Abstract
  30. Kozlikova, Barbora ; Krone, Michael ; Lindow, Norbert ; Falk, Martin ; Baaden, Marc ; Baum, Daniel ; Viola, Ivan ; Parulek, Julius ; u. a.: Visualization of biomolecular structures: state of the art. In: Borgo, R. ; Ganovelli, F. ; Viola, I. (Hrsg.) ; Borgo, R. ; Ganovelli, F. ; Viola, I. (Hrsg.): Eurographics Conference on Visualization (EuroVis)-STARs, Eurographics Conference on Visualization (EuroVis)-STARs : The Eurographics Association, 2015 — ISBN 978-3-905674-99-6, S. 61–81
  31. Krone, Michael ; Müller, Christoph ; Ertl, Thomas ; Kauker, Daniel ; Silva, Augusto Cravo ; Salsa, Diana ; Gräber, Manuel ; Kallert, Manuela: Remote Rendering and User Interaction on Mobile Devices for Scientific Visualization. In: International Symposium on Visual Information Communication and Interaction (VINCI), International Symposium on Visual Information Communication and Interaction (VINCI). Bd. 8 : ACM, 2015
  32. Krone, Michael: Interactive Visual Analysis of Biomolecular Simulations, Universität Stuttgart, 2015
  33. Scharnowski, Katrin ; Krone, Michael ; Reina, Guido ; Kulschewski, Tobias ; Pleiss, Jürgen ; Ertl, Thomas: Comparative Visualization of Molecular Surfaces Using Deformable Models. In: Computer Graphics Forum, Computer Graphics Forum. Bd. 3 (2014), S. 191–200
  34. Krone, Michael ; Reina, Guido ; Schulz, Christoph ; Kulschewski, Tobias ; Pleiss, Jürgen ; Ertl, Thomas: Interactive extraction and tracking of biomolecular surface features. In: Comput. Graph. Forum, Comput. Graph. Forum. Bd. 32 (2013), S. 331–340
  35. Krone, Michael ; Falk, Martin ; Rehm, S. ; Pleiss, Jürgen ; Ertl, Thomas: Interactive exploration of protein cavities. In: Comput. Graph. Forum, Comput. Graph. Forum. Bd. 30 (2011), S. 673–682