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Publications

  1. Reina, Guido ; Gralka, Patrick ; Ertl, Thomas: A decade of particle-based scientific visualization. In: Holm, C. ; Ertl, T. ; Schmauder, S. ; Kästner, J. ; Groß, J. (Hrsg.) The European Physical Journal (Special Topics), The European Physical Journal (Special Topics). Bd. 227: Particle Methods in Natural Science and Engineering (2019), Nr. 14, S. 1705--1723
  2. Bergel, Alexandre ; Bhatele, Abhinav ; Boehme, David ; Gralka, Patrick ; Griffin, Kevin ; Hermanns, Marc-André ; Okanović, Dusan ; Pearce, Olga ; u. a.: Visual Analytics Challenges in Analyzing Calling Context Trees. In: Bhatele, A. ; Boehme, D. ; Levine, J. A. ; Malony, A. D. ; Schulz, M. (Hrsg.) ; Bhatele, A. ; Boehme, D. ; Levine, J. A. ; Malony, A. D. ; Schulz, M. (Hrsg.): Programming and Performance Visualization Tools, Programming and Performance Visualization Tools. Cham : Springer International Publishing, 2019 — ISBN 978-3-030-17872-7, S. 233--249
  3. Gralka, Patrick ; Becher, Michael ; Braun, Matthias ; Frieß, Florian ; Müller, Christoph ; Rau, Tobias ; Schatz, Karsten ; Schulz, Christoph ; u. a.: MegaMol -- a comprehensive prototyping framework for visualizations. In: The European Physical Journal (Special Topics), The European Physical Journal (Special Topics). Bd. 227: Particle Methods in Natural Science and Engineering (2019), Nr. 14, S. 1817--1829
  4. Ibrahim, Mohamed ; Wickenhäuser, Patrick ; Rautek, Peter ; Reina, Guido ; Hadwiger, Markus: Screen-Space Normal Distribution Function Caching for Consistent Multi-Resolution Rendering of Large Particle Data. In: IEEE Transactions on Visualization and Computer Graphics, IEEE Transactions on Visualization and Computer Graphics. Bd. 24 (2018), Nr. 1, S. 944–953
  5. Mwalongo, Finian ; Krone, Michael ; Reina, Guido ; Ertl, Thomas: Web-based Volume Rendering using Progressive Importance-based Data Transfer. In: Proceedings of Vision, Modeling, and Visualization (VMV), Proceedings of Vision, Modeling, and Visualization (VMV), 2018
  6. Bergel, A. ; Bhatale, A. ; Boehme, D. ; Gralka, P. ; Griffin, K. ; Hermanns, M.-A. ; Okanović, D. ; Pearce, O. ; u. a.: Visual Analytics Challenges in Analyzing Calling Context Trees. In: 5th International Workshop on Visual Performance Analysis, 5th International Workshop on Visual Performance Analysis. (2018)
  7. Krone, Michael ; Grottel, Sebastian ; Reina, Guido ; Müller, Christoph ; Ertl, Thomas: 10 Years of MegaMol: The Pain and Gain of Creating Your Own Visualization Framework. In: IEEE Computer Graphics and Applications, IEEE Computer Graphics and Applications. Bd. 38 (2018), Nr. 1, S. 109--114
  8. Rau, Tobias ; Krone, Michael ; Reina, Guido ; Ertl, Thomas: Challenges and Opportunities using Software-defined Visualization in MegaMol. In: 7th Workshop on Visual Analytics, Information Visualization and Scientific Visualization, 7th Workshop on Visual Analytics, Information Visualization and Scientific Visualization, 2017
  9. Krone, Michael ; Frieß, Florian ; Scharnowski, Katrin ; Reina, Guido ; Fademrecht, Silvia ; Kulschewski, Tobias ; Pleiss, Jürgen ; Ertl, Thomas: Molecular Surface Maps. In: IEEE Transactions on Visualization and Computer Graphics (Proceedings of the Scientific Visualization 2016), IEEE Transactions on Visualization and Computer Graphics (Proceedings of the Scientific Visualization 2016). Bd. 23 (2017a), Nr. 1
  10. Schatz, Karsten ; Krone, Michael ; Müller, Christoph ; Schneider, Jens ; Reina, Guido ; Ertl, Thomas: Visualization of Halo Topologies in Dark Matter Simulations. In: Proceedings of TopoInVis, Proceedings of TopoInVis, 2017. — Rezensiertes Abstract
  11. Krone, Michael ; Reina, Guido ; Zahn, Sebastian ; Tremel, Tina ; Bahnmüller, Carsten ; Ertl, Thomas: Implicit Sphere Shadow Maps. In: IEEE PacificVis - Visualization Notes, IEEE PacificVis - Visualization Notes. Bd. 4, 2017b
  12. Gralka, Patrick ; Grottel, Sebastian ; Staib, Joachim ; Schatz, Karsten ; Karch, Grzegorz Karol ; Hirschler, M. ; Krone, Michael ; Reina, Guido ; u. a.: 2016 IEEE Scientific Visualization Contest Winner: Visual and Structural Analysis of Point-based Simulation Ensembles. In: IEEE Computer Graphics & Applications, IEEE Computer Graphics & Applications. (2017a)
  13. Gralka, Patrick ; Schulz, Christoph ; Reina, Guido ; Weiskopf, Daniel ; Ertl, Thomas: Visual Exploration of Memory Traces and Call Stacks. In: 2017 IEEE Working Conference on Software Visualization (VISSOFT), 2017 IEEE Working Conference on Software Visualization (VISSOFT) : IEEE, 2017b, S. 54–63
  14. Krone, Michael ; Schatz, Karsten ; Hieronymus, Nora ; Müller, Christoph ; Becher, Michael ; Barthelmes, Tina ; Cooper, April ; Currle, Steffen ; u. a.: From Visualization Research to Public Presentation - Design and Realization of a Scientific Exhibition. In: Proceedings of SIGRAD 2017, Proceedings of SIGRAD 2017, 2017c
  15. Müller, Christoph ; Krone, Michael ; Scharnowski, Katrin ; Reina, Guido ; Ertl, Thomas: An Evaluation of the Utility of Large High-Resolution Displays for Comparative Scientific Visualisation. In: International Journal of Software and Informatics (IJSI), International Journal of Software and Informatics (IJSI). Bd. 9 (2016), Nr. 3, S. 355–370
  16. Falk, Martin ; Grottel, Sebastian ; Krone, Michael ; Reina, Guido: Interactive GPU-based Visualization of Large Dynamic Particle Data. In: Synthesis Lectures on Visualization, Synthesis Lectures on Visualization. Bd. 4, Morgan & Claypool Publishers (2016), Nr. 3, S. 1--121
  17. Kauker, Daniel ; Falk, Martin ; Reina, Guido ; Ynnerman, Anders ; Ertl, Thomas: VoxLink - Combining sparse volumetric data and geometry for efficient rendering. In: Computational Visual Media, Computational Visual Media. Bd. 2 (2016), Nr. 1, S. 45–56
  18. Mwalongo, Finian ; Krone, Michael ; Reina, Guido ; Ertl, Thomas: State-of-the-Art Report in Web-based Visualization. In: Computer Graphics Forum, Computer Graphics Forum. Bd. 35, Whiley (2016b), Nr. 3
  19. Grottel, Sebastian ; Reina, Guido ; Krone, Michael ; Müller, Christoph ; Ertl, Thomas: MegaMol - for Fun and Profit. In: Workshop on Visualization in Practice, Workshop on Visualization in Practice, 2016
  20. Mwalongo, Finian ; Krone, Michael ; Becher, Michael ; Reina, Guido ; Ertl, Thomas: GPU-based Remote Visualization of Dynamic Molecular Data on the Web. In: Graphical Models, Graphical Models. Bd. 88, Elsevier (2016a)
  21. Schatz, Karsten ; Müller, Christoph ; Krone, Michael ; Schneider, Jens ; Reina, Guido ; Ertl, Thomas: Interactive Visual Exploration of a Trillion Particles. In: IEEE (Hrsg.) ; IEEE (Hrsg.): Symposium on Large Data Analysis and Visualization (LDAV), Symposium on Large Data Analysis and Visualization (LDAV), 2016
  22. Panagiotidis, Alexandros ; Frey, Steffen ; Ertl, Thomas: Exploratory Performance Analysis and Tuning of Parallel Interactive Volume Visualization on Large Displays. In: Bertini, E. ; Kennedy, J. ; Puppo, E. (Hrsg.) ; Bertini, E. ; Kennedy, J. ; Puppo, E. (Hrsg.): Eurographics Conference on Visualization - Short Papers, Eurographics Conference on Visualization - Short Papers : Eurographics Association, 2015a
  23. Grottel, Sebastian ; Krone, Michael ; Müller, Christoph ; Reina, Guido ; Ertl, Thomas: MegaMol – A Prototyping Framework for Particle-based Visualization. In: IEEE Transactions on Visualization and Computer Graphics, IEEE Transactions on Visualization and Computer Graphics. Bd. 21, IEEE (2015), Nr. 2
  24. Kauker, Daniel: Distributed computing and transparency rendering for large displays, Visualisierungsinstitut der Universität Stuttgart, 2015
  25. Mwalongo, Finian ; Krone, Michael ; Becher, Michael ; Reina, Guido ; Ertl, Thomas: Remote Visualization of Dynamic Molecular Data using WebGL. In: ACM (Hrsg.) ; ACM (Hrsg.): International Conference on 3D Web Technology (Web3D), International Conference on 3D Web Technology (Web3D). Bd. 20, 2015
  26. Müller, Christoph ; Krone, Michael ; Scharnowski, Katrin ; Reina, Guido ; Ertl, Thomas: On the Utility of Large High-Resolution Displays for Comparative Scientific Visualisation. In: International Symposium on Visual Information Communication and Interaction (VINCI), International Symposium on Visual Information Communication and Interaction (VINCI). Bd. 15 : ACM, 2015, S. 131–136
  27. Panagiotidis, Alexandros ; Reina, Guido ; Burch, Michael ; Pfannkuch, Tilo ; Ertl, Thomas: Consistently GPU-Accelerated Graph Visualization. In: International Symposium on Visual Information Communication and Interaction, International Symposium on Visual Information Communication and Interaction. Bd. 15 : ACM, 2015b, S. 35–41
  28. Scharnowski, Katrin ; Krone, Michael ; Reina, Guido ; Ertl, Thomas: On the Reproducibility of our Biomolecular Visualization. In: Aigner, W. ; Rosenthal, P. ; Scheidegger, C. (Hrsg.) ; Aigner, W. ; Rosenthal, P. ; Scheidegger, C. (Hrsg.): EuroRV3: EuroVis Workshop on Reproducibility, Verification, and Validation in Visualization, EuroRV3: EuroVis Workshop on Reproducibility, Verification, and Validation in Visualization. Bd. 3 : The Eurographics Association, 2015. — Rezensiertes Abstract
  29. Krone, Michael ; Huber, Markus ; Scharnowski, Katrin ; Hirschler, Manuel ; Kauker, Daniel ; Reina, Guido ; Nieken, Ulrich ; Weiskopf, Daniel ; u. a.: Evaluation of Visualizations for Interface Analysis of SPH. In: EuroVis 2014 Short Papers, EuroVis 2014 Short Papers. Bd. 3, 2014a
  30. Ertl, Thomas ; Krone, Michael ; Kesselheim, Stefan ; Scharnowski, Katrin ; Reina, Guido ; Holm, Christian: Visual Analysis for Space-Time Aggregation of Biomolecular Simulations. In: for Chemistry, R. S. (Hrsg.) Faraday Discussions, Faraday Discussions. Bd. 169 (2014)
  31. Scharnowski, Katrin ; Krone, Michael ; Reina, Guido ; Kulschewski, Tobias ; Pleiss, Jürgen ; Ertl, Thomas: Comparative Visualization of Molecular Surfaces Using Deformable Models. In: Computer Graphics Forum, Computer Graphics Forum. Bd. 33 (2014), Nr. 3
  32. Krone, Michael ; Kauker, Daniel ; Reina, Guido ; Ertl, Thomas: Visual Analysis of Dynamic Protein Cavities and Binding Sites. In: IEEE PacificVis - Visualization Notes, IEEE PacificVis - Visualization Notes. Bd. 1, 2014b
  33. Mwalongo, Finian ; Krone, Michael ; Karch, Grzegorz Karol ; Becher, Michael ; Reina, Guido ; Ertl, Thomas: Visualization of Molecular Structures using State-of-the-Art Techniques in WebGL. In: International Conference on 3D Web Technology (Web3D’14), International Conference on 3D Web Technology (Web3D’14). Bd. 19, 2014
  34. Kauker, Daniel ; Krone, Michael ; Panagiotidis, Alexandros ; Reina, Guido ; Ertl, Thomas: Rendering Molecular Surfaces using Order-Independent Transparency. In: Association, E. (Hrsg.) ; Association, E. (Hrsg.): Eurographics Symposium on Parallel Graphics and Visualization (EGPGV), Eurographics Symposium on Parallel Graphics and Visualization (EGPGV). Bd. 13, 2013b
  35. Krone, Michael ; Reina, Guido ; Schulz, Christoph ; Kulschewski, Tobias ; Pleiss, Jürgen ; Ertl, Thomas: Interactive Extraction and Tracking of Biomolecular Surfaces Features. In: Computer Graphics Forum, Computer Graphics Forum. Bd. 32 (2013), Nr. 3
  36. Kauker, Daniel ; Krone, Michael ; Panagiotidis, Alexandros ; Reina, Guido ; Ertl, Thomas: Evaluation of per-pixel linked lists for distributed rendering and comparative analysis. In: Lamberti, F. ; Sanna, A. (Hrsg.) Computing and Visualization in Science, Computing and Visualization in Science. Bd. 15, Springer Berlin (2013a), Nr. 3
  37. Gralka, Patrick ; Grottel, Sebastian ; Reina, Guido ; Ertl, Thomas: Application-Specific Compression of Large MD Data Preserving Physical Characteristics. In: Proceedings of IEEE Symposium on Large-Scale Data Analysis and Visualization, Proceedings of IEEE Symposium on Large-Scale Data Analysis and Visualization. Bd. 2013, 2013
  38. Ament, Marco ; Frey, Steffen ; Müller, Christoph ; Grottel, Sebastian ; Ertl, Thomas ; Weiskopf, Daniel: GPU-Accelerated Visualization. In: Bethel, E. W. ; Childs, H. ; Hansen, C. (Hrsg.) ; Bethel, E. W. ; Childs, H. ; Hansen, C. (Hrsg.): High Performance Visualization: Enabling Extreme-Scale Scientific Insight, High Performance Visualization: Enabling Extreme-Scale Scientific Insight : Chapman and Hall/CRC, 2012
  39. Grottel, Sebastian ; Krone, Michael ; Scharnowski, Katrin ; Ertl, Thomas: Object-Space Ambient Occlusion for Molecular Dynamics. In: Proceedings of IEEE Pacific Visualization Symposium 2012, Proceedings of IEEE Pacific Visualization Symposium 2012, 2012b
  40. Frey, Steffen ; Reina, Guido ; Ertl, Thomas: SIMT Microscheduling: Reducing Thread Stalling in Divergent Iterative Algorithms. In: 20th Euromicro International Conference on Parallel, Distributed and Network-Based Processing (PDP), 2012, 20th Euromicro International Conference on Parallel, Distributed and Network-Based Processing (PDP), 2012, 2012
  41. Grottel, Sebastian: Point-based Visualization of Molecular Dynamics Data Sets, Visualisierungsinstitut der Universität Stuttgart, 2012
  42. Grottel, Sebastian ; Beck, Philipp ; Müller, Christoph ; Reina, Guido ; Roth, Johannes ; Trebin, Hans-Rainer ; Ertl, Thomas: Visualization of Electrostatic Dipoles in Molecular Dynamics of Metal Oxides. In: IEEE Transactions on Visualization and Computer Graphics, IEEE Transactions on Visualization and Computer Graphics. Bd. 18 (2012a), Nr. 12
  43. Frey, Steffen ; Schlömer, Thomas ; Grottel, Sebastian ; Dachsbacher, Carsten ; Deussen, Oliver ; Ertl, Thomas: Loose Capacity-Constrained Representatives for the Qualitative Visual Analysis in Molecular Dynamics. In: Proceedings of the 2011 IEEE Pacific Visualization Symposium, Proceedings of the 2011 IEEE Pacific Visualization Symposium : IEEE Computer Society, 2011
  44. Krone, Michael ; Grottel, Sebastian ; Ertl, Thomas: Parallel Contour-Buildup Algorithm for the Molecular Surface. In: Proceedings of IEEE Symposium on Biological Data Visualization (biovis’11), Proceedings of IEEE Symposium on Biological Data Visualization (biovis’11), 2011
  45. Thomaß, Bertram ; Walter, Jonathan ; Krone, Michael ; Hasse, Hans ; Ertl, Thomas: Interactive Exploration of Polymer-Solvent Interactions. In: International Workshop on Vision, Modeling and Visualization, International Workshop on Vision, Modeling and Visualization. Bd. 16, 2011
  46. Falk, Martin ; Grottel, Sebastian ; Ertl, Thomas: Interactive Image-Space Volume Visualization for Dynamic Particle Simulations. In: Proceedings of The Annual SIGRAD Conference, Proceedings of The Annual SIGRAD Conference : Linköping University Electronic Press, 2010
  47. Grottel, Sebastian ; Reina, Guido ; Dachsbacher, Carsten ; Ertl, Thomas: Coherent Culling and Shading for Large Molecular Dynamics Visualization. In: Association, T. E. (Hrsg.) Computer Graphics Forum, Computer Graphics Forum. Bd. 29, Blackwell Publishing Ltd. (2010a), Nr. 3
  48. Grottel, Sebastian ; Reina, Guido ; Zauner, Thomas ; Hilfer, Rudolf ; Ertl, Thomas: Particle-based Rendering for Porous Media. In: Proceedings of The Annual SIGRAD Conference, Proceedings of The Annual SIGRAD Conference : Linköping University Electronic Press, 2010b
  49. Grottel, Sebastian ; Dietrich, Carlos A. ; Comba, João Luiz Dihl ; Ertl, Thomas: Topological Extraction and Tracking of Defects in Crystal Structures. In:  : Springer, 2009a
  50. Grottel, Sebastian ; Reina, Guido ; Ertl, Thomas: Optimized Data Transfer for Time-dependent, GPU-based Glyphs. In: Proceedings of IEEE Pacific Visualization Symposium 2009, Proceedings of IEEE Pacific Visualization Symposium 2009, 2009b
  51. Reina, Guido: Visualization of Uncorrelated Point Data, Visualisierungsinstitut der Universität Stuttgart, 2008
  52. Horsch, Martin ; Vrabec, Jadran ; Bernreuther, Martin ; Grottel, Sebastian ; Reina, Guido ; Wix, Andrea ; Schaber, Karlheinz ; Hasse, Hans: Homogeneous nucleation in supersaturated vapors of methane, ethane, and carbon dioxide predicted by brute force molecular dynamics. In: Journal of Chemical Physics, Journal of Chemical Physics. Bd. 128 (2008), Nr. 16
  53. Grottel, Sebastian ; Reina, Guido ; Vrabec, Jadran ; Ertl, Thomas: Visual Verification and Analysis of Cluster Detection for Molecular Dynamics. In: Proceedings of IEEE Visualization ’07, Proceedings of IEEE Visualization ’07. Bd. 13, 2007
  54. Müller, Christoph ; Grottel, Sebastian ; Ertl, Thomas: Image-Space GPU Metaballs for Time-Dependent Particle Data Sets. In: Proceedings of VMV ’07, Proceedings of VMV ’07, 2007